I think it is important to have separate the file & line specifiers in "break set" because that way no matter what you've named your file, it will always be easy to pass it to lldb. OTOH, for most filenames the "file:line:column" format is unambiguous, and we do print line spec's as "foo.c:10:20" so by rights there should be a way to use that specification.
This patch adds another option to break set (and also source list) that takes a specification of this form. I called it "-y" partly because there aren't that many letters left to use in "break set". Also, y is pretty easy to type, and it's the Spanish equivalent of "and", and since this is a "file AND line" specifier, that provides not too bad of a mnemonic.
For now I reused the source file completer for this, since if you are typing the source file part, that will do the right thing, and we don't do much useful completion on the line & column at present. It would be a nice polish to have another completer that put a ":" after the filename it completes, but I'm not going to do that in this patch. Even nicer would be to have a completer that would complete the line & column entries to only the file/line/column combinations that have line table entries. But that's definitely another patch.
This actually looks like a legit issue.