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Add geomean column earlier to dataout as Series in

Authored by fhahn on Jul 2 2019, 4:03 AM.



This fixes the following error when using --all.

Traceback (most recent call last):

File "test-suite/utils/", line 374, in <module>
  print_result(data, limit_output, shorten_names, config.show_diff, sortkey)
File "test-suite/utils/", line 227, in print_result
  dataout = add_geomean_row(d, dataout)
File "test-suite/utils/", line 139, in add_geomean_row
  relative = values1 / values0
File "pyvenv/lib/python2.7/site-packages/pandas/core/", line 1583, in wrapper
  result = safe_na_op(lvalues, rvalues)
File "pyvenv/lib/python2.7/site-packages/pandas/core/", line 1533, in safe_na_op
  lambda x: op(x, rvalues))
File "pandas/_libs/algos.pyx", line 690, in pandas._libs.algos.arrmap
File "pyvenv/lib/python2.7/site-packages/pandas/core/", line 1533, in <lambda>
  lambda x: op(x, rvalues))

TypeError: ufunc 'true_divide' not supported for the input types, and the inputs could not be safely coerced to any supported types according to the casting rule ''safe''

Diff Detail


Event Timeline

fhahn created this revision.Jul 2 2019, 4:03 AM
Herald added a project: Restricted Project. · View Herald TranscriptJul 2 2019, 4:03 AM

Any chance you could have a quick look Jessica?

paquette accepted this revision.Jul 23 2019, 2:04 PM

Sorry, I didn't get the email for this for some reason.

LGTM, thanks for fixing this!

This revision is now accepted and ready to land.Jul 23 2019, 2:04 PM
This revision was automatically updated to reflect the committed changes.