Attribute SizeOfOptionalHeader is ignored if no PE header is present in the file. This attribute should be ignored according to standard, however there are uses of this field even though it should not be used.
This change does not conform to PE/COFF standard, but there are several COFF files without PE header, where you had to add up SizeOfOptionalHeader in order to get proper section headers. Other tools and their own parsers do take this into account.